Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015860891.1_cds_XP_016514751.1_27170
CDS Infomation

[gene=LOC107831499] [db_xref=GeneID:107831499] [protein=alpha-galactosidase 1-like] [protein_id=XP_016514751.1] [location=join(42760..42854,57776..57834,57932..57988,59015..59103,59191..59249,59355..59420,59540..59623,59698..59762,59832..59914,60018..60108,60219..60409,60888..60989)] [gbkey=CDS]
Sequence

ATGGCTACTGATATCCGCCGTATGTGGTGGTTATTCCCACCGGCCGACGGTGGGACTGCA
GTGGCCGGAACGGCAGCAGCAAAAGGAGGAAGTAGGTGGAGTAGTTGGAATCATTTTGGC
TGTAACATTGATGAGAATGTCATAAGAGAAACTGCTGATGCCTTGGTTTCAACTGGTCTT
GATAAGCTTGGATATAAGTATGTTAATATCGCAGAAAACTGCAGTTATTATACTTGCAGC
AGAAAAATGCCTGGTTCACTTGGTCATGAGGAACAAGATGCAAAATCTTTTGCAGCATGG
GGAATTGATTATTTGAAGTATGACAATAGCAACCATGATGGAACAAAGCCAACTGTGCGG
TATCCTGTAATGACAAGAGCTCTCATGAACGCTGGACGGCCTATCTTCTTTAGTCTTTGT
GAATGGGGTGACTTGCATCCGGCATTGTGGGGTGGCAAAGTAGGTAACAGTTGGAGAAAC
ACAATCGATATTCAGGATACATGGGAAAGCATGATTTCGCGAGCAGACCAGAATGAAGTT
TATGCAGACATTGCGCAACCTGGTGGTTGGAATGATTCTGATATGCTTGAGGTGGGAAAT
GGAGGAATGACAAAGGATGAATACATTGTCCACTTTAGTCTCTGGGCGATTTCAAAGGCT
CCCCTTATCATCGGTTGTGATGTGAGAAACTTATCAAATGATACCAAAGAAATACTTGCC
AACAAGGAGGTCATTGCTGTGAACCAAGATGAATTAGGTATCCAGGGAAAAAAGGTTAGA
ATGCAAGGCGATCTCGAGGTGTGGGCAGGGCCTCTATCAGGCTATAGAGCAGCTCTAGTG
CTTCTCAATCGCGGCTCAACTAAAATAGAAATAACAGCTCTCTGGGAAGACATTGGGATT
CCTCCTAACAGTGTTGTAGAGGCAAGAGACCTTTGGGAGATGCAACACAACACATTGGAG
TCAAGATTTGCGGGGAATTTGACAGCAACAGTGAACTCTCATGCATGCAAGATGTATGTA
TTGAAGCCTATTGCTTCATGA

Peptide Sequence

PEP ID

XP_016514751.1
PEP Infomation

PREDICTED: alpha-galactosidase 1-like [Nicotiana tabacum]
Sequence

MATDIRRMWWLFPPADGGTAVAGTAAAKGGSRWSSWNHFGCNIDENVIRETADALVSTGL
DKLGYKYVNIAENCSYYTCSRKMPGSLGHEEQDAKSFAAWGIDYLKYDNSNHDGTKPTVR
YPVMTRALMNAGRPIFFSLCEWGDLHPALWGGKVGNSWRNTIDIQDTWESMISRADQNEV
YADIAQPGGWNDSDMLEVGNGGMTKDEYIVHFSLWAISKAPLIIGCDVRNLSNDTKEILA
NKEVIAVNQDELGIQGKKVRMQGDLEVWAGPLSGYRAALVLLNRGSTKIEITALWEDIGI
PPNSVVEARDLWEMQHNTLESRFAGNLTATVNSHACKMYVLKPIAS

Transcript Sequence

Gene sequence data has not been registered.